Input format: tab
Simple two column tab separated sequence files, where each line holds a record's identifier and sequence. For example, this is used by Aligent's eArray software when saving microarray probes in a minimal tab delimited text file.
Output format: fasta
This refers to the input FASTA file format introduced for Bill Pearson's FASTA tool, where each record starts with a '>' line. Resulting sequences have a generic alphabet by default.
How to convert from tab to fasta ?
You can also convert between these formats by using command line tools.
On Windows install WSL, on
Mac
or Linux start
terminal
Install BioPython
Run following script:
Or you can use this site as online tab to fasta converter by selecting your formats &
file.
Sequence Converter Home page
from Bio import SeqIO
records = SeqIO.parse("THIS_IS_YOUR_INPUT_FILE.tab", "tab")
count = SeqIO.write(records, "THIS_IS_YOUR_OUTPUT_FILE.fasta", "fasta")
print("Converted %i records" % count)