#NEXUS begin data; dimensions ntax=3 nchar=39; format datatype=dna missing=? gap=-; matrix seq1 ATGGCCATTGTAATGGGCCGCTGAAAGGGTGCCCGATAG seq2 ATGGCCATTGTAATGGGCCGCTGAAAGGGTGCCCGA--- seq3 ATGTTCGCGATTGTAATGGGCCGCTGAAAGGGTGCCCGA ; end;